Manipulating samples from a distribution

extract_draws()

Extract parameters' draws

extract_distribution()

Extract a distribution represented by samples

extract_pmf()

Extract probability mass function from vector of samples

extract_pdf()

Extract probability density function from vector of samples

extract_ci()

Extract confidence intervals from a vector of samples

Analysing Bayesian model fit

summary_statistics()

Extract summary statistics

combine_prior_posterior() plot_prior_posterior() compute_prior_influence() plot_prior_influence() check_model_sensitivity()

Compare prior to posterior

compute_coverage() plot_coverage()

Coverage probability

PPC_group_distribution()

Posterior Predictive Check for Stan model

empirical_pval()

Compute empirical p-values

post_pred_pval()

Posterior Predictive p-value

compute_rsquared()

Compute Bayesian R-squared from matrix of posterior replications

Statistical calibration

compute_calibration()

Estimate calibration given forecasts and corresponding outcomes

compute_RPS()

Compute RPS for a single forecast

compute_resolution()

Compute resolution of forecasts, normalised by the uncertainty

Predicates

is_scalar()

Test whether x is of length 1

is_wholenumber() is_scalar_wholenumber()

Test whether x is a whole number

is_stanfit()

Test whether an object is of class "stanfit"

Miscellaneous

cbbPalette

A colour blind friendly palette (with black)

logit() inv_logit()

Logit and Inverse logit

approx_equal() `%~%`

Approximate equal

factor_to_numeric()

Change the type of the column of a dataframe from factor to numeric

extract_index_nd()

Extract multiple indices inside bracket(s) as a list

Deprecated

change_colnames()

Change column names of a dataframe

extract_parameters_from_draw()

Extract parameters from a single draw

process_replications()

Extract posterior predictive distribution